BIOMEDICAL GENOMICS CENTER
Li LL, Munir S, Bannantine JP, Sreevastab S, Kanjilal S, Kapur V. Rapid expression of mycobacterium avium subsp paratuberculosis recombinant proteins for antigen discovery. Clinical and Vaccine Immunology. 2007;14(1):102-105.
Treff NR, Vincent RK, Budde ML, Browning VL, Magliocca JF, Kapur V, Odorico JS. Differentiation of embryonic stem cells conditionally expressing neurogenin 3. Stem Cells. 2006;24(11)2529-37.
Blazquez J, Gomez-Gomez JM, Oliver A, Juan C, Kapur V, Martin S. PBP3 inhibition elicits adaptive responses in pseudomonas aeruginosa. Molecular Microbiology. 2006;62(1):84-99.
Marsh IB, Bannantine JP,
Paustian ML, Tizard ML, Kapur V, Whittington, RJ. Genomic comparison of Mycobacterium
avium subsp paratuberculosis sheep and cattle strains by microarray hybridization. Journal of Bacteriology.
2006;188(6):2290-93.
Janagama HK, Jeong K, Kapur V, Coussens P, Sreevatsan S. Cytokine responses of bovine macrophages to diverse clinical Mycobacterium avium subspecies paratuberculosis strains. BMC Microbiology.
2006;6:10.
Munir S,
Kaur K, Kapur V. Avian metapneumovirus phosphoprotein targeted RNA interference silences the expression of
viral proteins and inhibits virus replication. Antiviral Research. 2006;69(1):46-51.
Motiwala, AS, Strother, M,
Theus, NE, Stich, RW, Byrum, B, Shulaw, WP, Kapur, V, Sreevatsan, S. Rapid detection and typing of strains
of Mycobacterium avium subsparatuberculosis from broth cultures. Journal of Clinical Microbiology. May
2005; 43(5):2111-2117.
Halling, SM, Peterson-Burch,
BD, Bricker, BJ, Zuerner, RL, Qing, Z, Li, LL, Kapur, V, Alt, DP, Olsen, SC. Completion of the genome
sequence of Brucella abortus and comparison to the highly similar genomes of Brucella melitensis and
Brucella suis. Journal of Bacteriology. 2005; 187(8):2715-2726.
Paustian, ML, Kapur, V,
Bannantine, JP. Comparative genomic hybridizations reveal genetic regions within the Mycobacterium avium
complex that are divergent from Mycobacterium avium subsp paratuberculosis isolates. Journal of
Bacteriology. 2005; 1878(7);2406-2415.
Hirt, H, Manias, DA, Bryan, EM,
Klein, JR, Marklund, JK, Staddon, JH, Paustian, ML, Kapur, V, Dunny, GM. Characterization of
the pheromone response of the Enterococcus faecalis conjugative plasmid pCF10:
Complete sequence and comparative analysis of the transcriptional and phenotypic responses of
pCF10-containing cells to pheromone induction. Journal of Bacteriology. 2005;187(3):1044-1054.
Gadgil, M, Kapur, V, Hu, WS.
Transcriptional response of Escherichia coli to temperature shift. Abstracts of Papers of the American
Chemical Society. 2004; 227 Part 1:205.
Munir, S, Sharma, JM, Kapur, V.
Transcriptional response of avian cells to infection with Newcastle disease virus. Virus Research. 2005;
107(1):103-108.
Rishi, AS, Munir, S, Kapur, V,
Nelson, ND, Goyal, A. Identification and analysis of safener-inducible expressed sequence tags in Populus
using a cDNA microarray. Planta. 2004; 220(2);296-306.
Rock, RB, Hu, S, Deshpande, A,
Munir, S, May, BJ, Baker, CA, Peterson, PK, Kapur, V. Transcriptional response of
human microglial cells to interferon-gamma. Genes and Immunity. 2005;6(8):712-719.
Rock, RB, Hu, SX, Gekker, G,
Sheng, WS, May, B, Kapur, V, Peterson, PK. Mycobacterium tuberculosis - Induced cytokine and chemokine
expression by human microglia and astrocytes: Effects of dexamethasone. Journal of Infectious Diseases.
2005; 192(12):2054-2058.
Li, LL, Bannantine, JP, Zhang,
Q, Amonsin, A, May, BJ, Alt, D, Banerji, N, Kanjilal, S, Kapur, V. The complete genome sequence of
Mycobacterium avium subspecies paratuberculosis. Proceedings of the National Academy of Sciences of the
Universted States of America. 2005;102(35):12344-12349.
Aakra, A, Vebo, H, Snipen, L,
Hirt, H, Aastveit, A, Kapur, V, Dunny, G, Murray, BE, Nes, Transcriptional response of Enterococcus
faecalis V583 to erythromycin. Antimicrobial Agents and Chemotherapy. 2005;49(9):3989.
Kiehnbaum, LA, Amonsin, A,
Wells, SJ, Kapur, V. Amplified fragment length polymorphism to detect clonal diversity and distribution of
Mycobacterium avium subspecies paratuberculosis in selected Minnesota dairy cattle. Journal of Veterinary
Diagnostic Investigation. 2005;17(4):311-315).
Gadgil, M, Lian, W, Gadgil, C,
Kapur, V, Wu, WS. An analysis of the use of genomic DNA as a universal reference in two channel DNA
microarrays. BMC Genomics. 2005:66.
Gadgil, M, Kapur, V, Hu, WS.
Transcriptional response of Escherichia coli to temperature shift. Biotechnology Progress.
2005;21(3):689-699.
Aakra, A, Vebo, H, Snipen, L,
Hirt, H, Aastveit, A, Kapur, V, Dunny, G, Murray, B, Nes, IF. Transcriptional response of Enterococcus
faecalis V583 to erythromycin. Antimicrobial Agents and Chemotherapy. 2005; 49(6):2246-2259.
Dar, A, Munir, S, Vishwanathan,
S, Manuja, A, Griebel, P, Tikoo, S, Townsend, H, Potter, A, Kapur, V, Babiuk, LA. Transcriptional analysis
of avian embryonic tissues following infection with avian infectious bronchitis virus. Virus Research.
2005;110(1-2):41-55.
Motiwala AS, Amonsin A,
Strother M, Manning EJ, Kapur V, Sreevatsan S. Molecular epidemiology of Mycobacterium avium subsp.
paratuberculosis isolates recovered from wild animal species. Journal of Clinical Microbiology.
2004;42(4):1703-12.
Amonsin A, Li LL, Zhang Q,
Bannantine JP, Motiwala AS, Sreevatsan S, Kapur V. Multilocus short sequence repeat sequencing approach for
differentiating among Mycobacterium avium subsp. paratuberculosis strains. Journal of Clinical Microbiology.
2004;42(4):1694-702.
Abrahamsen MS, Templeton TJ,
Enomoto S, Abrahante JE, Zhu G, Lancto CA, Deng M, Liu C, Widmer G, Tzipori S, Buck GA, Xu P, Bankier AT,
Dear PH, Konfortov BA, Spriggs HF, Iyer L, Anantharaman V, Aravind L, Kapur V. Complete genome sequence of
the apicomplexan, Cryptosporidium parvum. Science. 2004;304(5669):441-5.
Boyce JD, Wilkie I, Harper M,
Paustian ML, Kapur V, Adler B. Genomic-scale analysis of Pasteurella multocida gene expression during
growth within liver tissue of chickens with fowl cholera. Microbes and Infection. 2004;6(3):290-8.
Stratmann J, Strommenger B,
Goethe R, Dohmann K, Gerlach GF, Stevenson K, Li LL, Zhang Q, Kapur V, Bull TJ. A 38-kilobase pathogenicity
island specific for Mycobacterium avium subsp. paratuberculosis encodes cell surface proteins expressed in
the host. Infections and Immunity2004;72(3):1265-74.
Bannantine JP, Hansen JK,
Paustian ML, Amonsin A, Li LL, Stabel JR, Kapur V. Expression and immunogenicity of proteins encoded by
sequences specific to Mycobacterium avium subsp. paratuberculosis. Journal of Clinical Microbiology.
2004;42(1):106-14.
Dohmann K, Strommenger B,
Stevenson K, de Juan L, Stratmann J, Kapur V, Bull TJ, Gerlach GF. Characterization of genetic differences
between Mycobacterium avium subsp. paratuberculosis type I and type II isolates. Journal of Clinical
Microbiology. 2003;41(11):5215-23.
Herron-Olson L, Freeman J,
Zhang Q, Retzel EF, Kapur V. MGView: an alignment and visualization tool to enhance gap closure of
microbial genomes. Nucleic Acids Research. 2003;31(17):106.
Munir S, Kapur V.
Transcriptional analysis of the response of poultry species to respiratory pathogens. Poultry Science.
2003;82(6):885-92.
Dar AM, Munir S, Goyal SM,
Kapur V. Sequence analysis of the matrix (M2) protein gene of avian pneumovirus recovered from turkey
flocks in the United States. Journal of Clinical Microbiology. 2003;41(6):2748-51.
Rahman MT, Herron LL, Kapur V,
Meijer WG, Byrne BA, Ren J, Nicholson VM, Prescott JF. Partial genome sequencing of Rhodococcus equi ATCC
33701. Veterinary Microbiology. 2003;94(2):143-58.
Bannantine JP, Zhang Q, Li LL,
Kapur V. Genomic homogeneity between Mycobacterium avium subsp. avium and Mycobacterium avium subsp.
paratuberculosis belies their divergent growth rates. BMC Microbiology. 2003;3(1):10.
Motiwala AS, Strother M,
Amonsin A, Byrum B, Naser SA, Stabel JR, Shulaw WP, Bannantine JP, Kapur V, Sreevatsan S. Molecular
epidemiology of Mycobacterium avium subsp. paratuberculosis: evidence for limited strain diversity, strain
sharing, and identification of unique targets for diagnosis. Journal of Clinical Microbiology.
2003;41(5):2015-26.
Munir S, Kapur V. Regulation of
host cell transcriptional physiology by the avian pneumovirus provides key insights into host-pathogen
interactions. Journal of Virology. 2003;77(8):4899-910.
Baechler EC, Batliwalla FM,
Karypis G, Gaffney PM, Ortmann WA, Espe KJ, Shark KB, Grande WJ, Hughes KM, Kapur V, Gregersen PK, Behrens
TW. Interferon-inducible gene expression signature in peripheral blood cells of patients with severe lupus.
Proceedings of the National Academy of Science of the United States of America.
2003;100(5):2610-5.
Boyce JD, Wilkie I, Harper M,
Paustian ML, Kapur V, Adler B. Genomic scale analysis of Pasteurella multocida gene expression during
growth within the natural chicken host. Infection and Immunology. 2002;70(12):6871-9.
Paustian ML, May BJ, Cao D,
Boley D, Kapur V.Transcriptional response of Pasteurella multocida to defined iron sources. Journal of
Bacteriology. 2002;184(23):6714-20.
Widmer G, Lin L, Kapur V, Feng
X, Abrahamsen MS. Genomics and genetics of Cryptosporidium parvum: the key to understanding
cryptosporidiosis. Microbes & Infection. 2002;4(10):1081-90.
Amonsin A, Wellehan JF, Li LL,
Laber J, Kapur V. DNA fingerprinting of Pasteurella multocida recovered from avian sources. Journal of
Clinical Microbiology. 2002;40(8):3025-31.
Herron LL, Chakravarty R, Dwan
C, Fitzgerald JR, Musser JM, Retzel E, Kapur V. Genome sequence survey identifies unique sequences and key
virulence genes with unusual rates of amino acid substitution in bovine Staphylococcus aureus. Infection
and Immunology. 2002;70(7):3978-81.
Paustian ML, May BJ, Kapur V.
Transcriptional response of Pasteurella multocida to nutrient limitation. Journal of Bacteriology.
2002;184(13):3734-9.
Paustian ML, May BJ, Kapur V.
Pasteurella multocida gene expression in response to iron limitation. Infection and Immunology.
2001;69:4109-15.
